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1

Water activity in liquid food systems: a molecular scale interpretation

Maneffa, Andy J., Stenner, Richard, Matharu, Avtar S., Clark, James H., Matubayasi, Nobuyuki, Shimizu, Seishi

Journal:

Year:

2017

Language:

english

File:

PDF, 1.26 MB

english, 2017

2

Gelation of carrageenan: Effects of sugars and polyols

Stenner, Richard, Matubayasi, Nobuyuki, Shimizu, Seishi

Journal:

Food Hydrocolloids

Year:

2016

Language:

english

File:

PDF, 578 KB

english, 2016

3

Unveiling the Mechanism of Hydrotropy: Evidence for Water-Mediated Aggregation of Hydrotropes Around the Solute

Abranches, Dinis O, Benfica, Jordana, Soares, Bruna P., Leal-Duaso, Alejandro, Sintra, TÃ¢nia, Pires, Elisabet, Pinho, SimÃ£o P., Shimizu, Seishi, Coutinho, Joao A. P.

Journal:

Chemical Communications

Year:

2020

File:

PDF, 1.20 MB

2020

4

Sucrose–water mixture: From thermodynamics to solution structure

Shimizu, Seishi

Journal:

Chemical Physics Letters

Year:

2013

Language:

english

File:

PDF, 420 KB

english, 2013

5

Hydrotropy: binding models vs. statistical thermodynamics

Shimizu, Seishi, Booth, Jonathan J., Abbott, Steven

Journal:

Physical Chemistry Chemical Physics

Year:

2013

Language:

english

File:

PDF, 1.27 MB

english, 2013

6

Temperature dependence of hydrophobic interactions: A mean force perspective, effects of water density, and nonadditivity of thermodynamic signatures

Shimizu, Seishi, Chan, Hue Sun

Journal:

The Journal of Chemical Physics

Year:

2000

Language:

english

File:

PDF, 523 KB

english, 2000

7

Practical molecular thermodynamics for greener solution chemistry

Abbott, Steven, Booth, Jonathan J., Shimizu, Seishi

Journal:

Green Chemistry

Year:

2017

Language:

english

File:

PDF, 1.69 MB

english, 2017

8

The mechanism of salt effects on starch gelatinization from a statistical thermodynamic perspective

Nicol, Thomas W.J., Isobe, Noriyuki, Clark, James H., Matubayasi, Nobuyuki, Shimizu, Seishi

Journal:

Food Hydrocolloids

Year:

2018

Language:

english

File:

PDF, 2.15 MB

english, 2018

9

Statistical thermodynamics of regular solutions and solubility parameters

Shimizu, Seishi, Matubayasi, Nobuyuki

Journal:

Journal of Molecular Liquids

Year:

2018

Language:

english

File:

PDF, 885 KB

english, 2018

10

Glycerol Ethers as Hydrotropes and their use to Enhance the Solubility of Phenolic Acids in Water

Soares, Bruna P., Abranches, Dinis O., Sintra, TÃ¢nia E., Leal-Duaso, Alejandro, Garcia, Jose Ignacio, Pires, ElÃsabet, Shimizu, Seishi, Pinho, Simao P., Coutinho, Joao A.P.

Journal:

ACS Sustainable Chemistry & Engineering

Year:

2020

Language:

english

File:

PDF, 364 KB

english, 2020

11

[IEEE 2019 IEEE Visual Communications and Image Processing (VCIP) - Sydney, Australia (2019.12.1-2019.12.4)] 2019 IEEE Visual Communications and Image Processing (VCIP) - LF-TSP: Traveling salesman problem for HEVC-based light-field coding

Imaeda, Kota, Isechi, Kohei, Takahashi, Keita, Fujii, Toshiaki, Bandoh, Yukihiro, Miyazawa, Takehito, Takamura, Seishi, Shimizu, Atsushi

Year:

2019

Language:

english

File:

PDF, 1.78 MB

english, 2019

12

The hydrophobic effect and the excess free energy of solvation

Journal:

Chemical Physics Letters

Year:

2004

Language:

english

File:

PDF, 176 KB

english, 2004

13

Preferential hydration of proteins: A Kirkwood-Buff approach

Seishi Shimizu, Nobuyuki Matubayasi

Journal:

Chemical Physics Letters

Year:

2006

Language:

english

File:

PDF, 132 KB

english, 2006

14

Extracting contact free energy from solubility: excluded volume effects of polymers in continuum space

Seishi Shimizu, Mitsunori Ikeguchi, Kentaro Shimizu

Journal:

Chemical Physics Letters

Year:

1997

Language:

english

File:

PDF, 590 KB

english, 1997

15

An off-lattice theory of solvation: extension of the Flory χ parameter into continuum space

Seishi Shimizu, Mitsunori Ikeguchi, Kentaro Shimizu

Journal:

Chemical Physics Letters

Year:

1998

Language:

english

File:

PDF, 127 KB

english, 1998

16

Molecular volume, surface area, and curvature dependence of the configurational entropy change upon solvation: effects of molecular bonding

Seishi Shimizu, Mitsunori Ikeguchi, Shugo Nakamura, Kentaro Shimizu

Journal:

Chemical Physics Letters

Year:

1998

Language:

english

File:

PDF, 122 KB

english, 1998

17

Calculation of temperature dependence of free energy caused by potential function changes

Mitsunori Ikeguchi, Seishi Shimizu, Koichi Tazaki, Shugo Nakamura, Kentaro Shimizu

Journal:

Chemical Physics Letters

Year:

1998

Language:

english

File:

PDF, 108 KB

english, 1998

18

Anti-cooperativity and cooperativity in hydrophobic interactions: Three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins

Seishi Shimizu, Hue Sun Chan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 2.01 MB

english, 2002

19

Anti-cooperativity and cooperativity in hydrophobic interactions: Three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins

Seishi Shimizu, Hue Sun Chan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

File:

PDF, 18 KB

2002

20

Origins of protein denatured state compactness and hydrophobic clustering in aqueous urea: Inferences from nonpolar potentials of mean force

Seishi Shimizu, Hue Sun Chan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 175 KB

english, 2002

21

Notch1 oncoprotein antagonizes TGF-β/Smad-mediated cell growth suppression via sequestration of coactivator p300

Shigeo Masuda, Keiki Kumano, Kiyoshi Shimizu, Yoichi Imai, Mineo Kurokawa, Seishi Ogawa, Makoto Miyagishi, Kazunari Taira, Hisamaru Hirai, Shigeru Chiba

Journal:

Year:

2005

Language:

english

File:

PDF, 314 KB

english, 2005

22

Temperature Dependence of Three-Body Hydrophobic Interactions: Potential of Mean Force, Enthalpy, Entropy, Heat Capacity, and Nonadditivity

Moghaddam, Maria Sabaye, Shimizu, Seishi, Chan, Hue Sun

Journal:

Journal of the American Chemical Society

Year:

2005

Language:

english

File:

PDF, 297 KB

english, 2005

23

The effect of urea on hydrophobic hydration: Preferential interaction and the enthalpy of transfer

Journal:

Chemical Physics Letters

Year:

2011

Language:

english

File:

PDF, 184 KB

english, 2011

24

cDNA Cloning and Functional Analysis of the p97 Subunit of the 26S Proteasome, a Polypeptide Identical to the Type-1 Tumor-Necrosis-Factor-Receptor-Associated Protein-2/55.11

Chizuko Tsurumi, Yoshihisa Shimizu, Mihoro Saeki, Seishi Kato, George N. Demartino, Clive A. Slaughter, Masahiro Fujimuro, Hideyoshi Yokosawa, Moto-o Yamasaki, Klavs B. Hendil, Akio Toh-E, Nobuyuki Ta

Journal:

Year:

1996

Language:

english

File:

PDF, 1.23 MB

english, 1996

25

Retinol Transport in Cultured Stellate Cells of Rat Liver: Studies by Light and Electron Microscope Autoradiography

Tomokazu Matsuura, Seishi Nagamori, Satoshi Hasumura, Hajime Sujino, Keiichiro Shimizu, Minoru Niiya, Kazushige Hirosawa

Journal:

Experimental Cell Research

Year:

1993

File:

PDF, 1.54 MB

1993

26

Regulation of Vitamin A Transport into Cultured Stellate Cells of Rat Liver: Studies by Anchored Cell Analysis and Sorting System

Tomokazu Matsuura, Seishi Nagamori, Satoshi Hasumura, Hajime Sujino, Minoru Niiya, Keiichiro Shimizu

Journal:

Experimental Cell Research

Year:

1993

File:

PDF, 414 KB

1993

27

Temperature-sensitive defects of the GSP1gene, yeast Ran homologue, activate the Tel1-dependent pathway

Naoyuki Hayashi, Seishi Murakami, Susumu Tsurusaki, Zen-ichiro Nagaura, Masaya Oki, Hideo Nishitani, Masahiko Kobayashi, Hiroko Shimizu, Ken-ichi Yamamoto, Takeharu Nishimoto

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 755 KB

english, 2007

28

Mutations in Ran system affected telomere silencing in Saccharomyces cerevisiae

Naoyuki Hayashi, Masahiko Kobayashi, Hiroko Shimizu, Ken-ichi Yamamoto, Seishi Murakami, Takeharu Nishimoto

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 775 KB

english, 2007

29

Notch1 but Not Notch2 Is Essential for Generating Hematopoietic Stem Cells from Endothelial Cells

Keiki Kumano, Shigeru Chiba, Atsushi Kunisato, Masataka Sata, Toshiki Saito, Etsuko Nakagami-Yamaguchi, Tomoyuki Yamaguchi, Shigeo Masuda, Kiyoshi Shimizu, Tokiharu Takahashi, Seishi Ogawa, Yoshio Ham

Journal:

Year:

2003

Language:

english

File:

PDF, 724 KB

english, 2003

30

Configuration-Dependent Heat Capacity of Pairwise Hydrophobic Interactions

Shimizu, Seishi, Chan, Hue Sun

Journal:

Journal of the American Chemical Society

Year:

2001

Language:

english

File:

PDF, 90 KB

english, 2001

31

Molecular origin of the cosolvent-induced changes in the thermal stability of proteins

Journal:

Chemical Physics Letters

Year:

2011

Language:

english

File:

PDF, 174 KB

english, 2011

32

The Hofmeister series and protein-salt interactions

Shimizu, Seishi, McLaren, William M., Matubayasi, Nobuyuki

Journal:

The Journal of Chemical Physics

Year:

2006

Language:

english

File:

PDF, 402 KB

english, 2006

33

Mechanism of Hydrophobic Drug Solubilization by Small Molecule Hydrotropes

Booth, Jonathan J., Abbott, Steven, Shimizu, Seishi

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 1.00 MB

english, 2012

34

Roles of Hydrogen Bonding and the Hard Core of Water on Hydrophobic Hydration

Ikeguchi, Mitsunori, Shimizu, Seishi, Nakamura, Shugo, Shimizu, Kentaro

Journal:

Journal of Physical Chemistry B

Year:

1998

Language:

english

File:

PDF, 140 KB

english, 1998

35

Preferential Solvation: Dividing Surface vs Excess Numbers

Shimizu, Seishi, Matubayasi, Nobuyuki

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 481 KB

english, 2014

36

Calorimetric Dissection of Colicin DNase−Immunity Protein Complex Specificity †

Keeble, Anthony H., Kirkpatrick, Nadine, Shimizu, Seishi, Kleanthous, Colin

Journal:

Year:

2006

Language:

english

File:

PDF, 271 KB

english, 2006

37

Hydrotropy: Monomer–Micelle Equilibrium and Minimum Hydrotrope Concentration

Shimizu, Seishi, Matubayasi, Nobuyuki

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 568 KB

english, 2014

38

Alcohol Denaturation: Thermodynamic Theory of Peptide Unit Solvation

Shimizu, Seishi, Shimizu, Kentaro

Journal:

Journal of the American Chemical Society

Year:

1999

Language:

english

File:

PDF, 91 KB

english, 1999

39

Temperature Dependence of Three-Body Hydrophobic Interactions: Potential of Mean Force, Enthalpy, Entropy, Heat Capacity, and Nonadditivity [ J. Am. Chem. Soc. 2005 , 127 , 303−316].

Moghaddam, Maria Sabaye, Shimizu, Seishi, Chan, Hue Sun

Journal:

Journal of the American Chemical Society

Year:

2005

Language:

english

File:

PDF, 16 KB

english, 2005

40

Unexpected Preferential Dehydration of Artemisinin in Ionic Liquids

Sanders, Marc W., Wright, Lawrence, Tate, Lauren, Fairless, Gayle, Crowhurst, Lorna, Bruce, Neil C., Walker, Adam J., Hembury, Guy A., Shimizu, Seishi

Journal:

Journal of Physical Chemistry A

Year:

2009

Language:

english

File:

PDF, 197 KB

english, 2009

41

Comment on “Molecular Origin of Anticooperativity in Hydrophobic Association”

Shimizu, Seishi, Moghaddam, Maria Sabaye, Chan, Hue Sun

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 30 KB

english, 2005

42

Hydrophilicity, the major determining factor influencing the solvation environment of protic ionic liquids

Wright, Lawrence, Sanders, Marc W., Tate, Lauren, Fairless, Gayle, Crowhurst, Lorna, Bruce, Neil C., Walker, Adam J., Hembury, Guy A., Shimizu, Seishi

Journal:

Physical Chemistry Chemical Physics

Year:

2010

Language:

english

File:

PDF, 534 KB

english, 2010

43

[IEEE 2013 Picture Coding Symposium (PCS) - San Jose, CA, USA (2013.12.8-2013.12.11)] 2013 Picture Coding Symposium (PCS) - On intra coding using mode dependent 2D-KLT

Takamura, Seishi, Shimizu, Atsushi

Year:

2013

Language:

english

File:

PDF, 287 KB

english, 2013

44

Gelation: The Role of Sugars and Polyols on Gelatin and Agarose

Shimizu, Seishi, Matubayasi, Nobuyuki

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 270 KB

english, 2014

45

[IEEE 2013 Picture Coding Symposium (PCS) - San Jose, CA, USA (2013.12.8-2013.12.11)] 2013 Picture Coding Symposium (PCS) - Intra angular prediction with weight function and modification filter

Matsuo, Shohei, Takamura, Seishi, Shimizu, Atsushi

Year:

2013

Language:

english

File:

PDF, 809 KB

english, 2013

46

Immunohistochemical assessment of ATG7, LC3, and p62 in ameloblastomas

Okada, Miwa, Oikawa, Mariko, Miki, Yasuhiro, Shimizu, Yoshinaka, Echigo, Seishi, Takahashi, Tetsu, Kumamoto, Hiroyuki

Journal:

Journal of Oral Pathology & Medicine

Year:

2014

Language:

english

File:

PDF, 914 KB

english, 2014

47

Anti-cooperativity in hydrophobic interactions: A simulation study of spatial dependence of three-body effects and beyond

Shimizu, Seishi, Chan, Hue Sun

Journal:

The Journal of Chemical Physics

Year:

2001

Language:

english

File:

PDF, 356 KB

english, 2001

48

The Kirkwood–Buff theory and the effect of cosolvents on biochemical reactions

Shimizu, Seishi, Boon, Chandra L.

Journal:

The Journal of Chemical Physics

Year:

2004

Language:

english

File:

PDF, 353 KB

english, 2004

49

Size dependence of transfer free energies: A hard-sphere-chain- based formalism

Shimizu, Seishi, Ikeguchi, Mitsunori, Nakamura, Shugo, Shimizu, Kentaro

Journal:

The Journal of Chemical Physics

Year:

1999

Language:

english

File:

PDF, 464 KB

english, 1999

50

Estimation of excess solvation numbers of water and cosolvents from preferential interaction and volumetric experiments

Shimizu, Seishi

Journal:

The Journal of Chemical Physics

Year:

2004

Language:

english

File:

PDF, 270 KB

english, 2004